Function reference • BioMonTools

All functions
`MapTaxaObs()`	Taxa Observation Maps
`assign_IndexClass()`	Assign Index_Class
`data_Taxa_MA`	Estuary taxa data
`data_benthos_MBSS`	Benthic macroinvertebrate taxa data; MBSS
`data_benthos_PacNW`	Benthic macroinvertebrate taxa data; Pacific Northwest
`data_bio2rarify`	rarify example data
`data_coral_bcg_metric_dev`	Coral taxa data; Florida BCG.
`data_coral_bcg_metric_qc`	Coral metric value data; Florida BCG.
`data_diatom_mmi_dev`	Diatom taxa data; Indiana DEM
`data_diatom_mmi_qc`	Diatom metric value data; Indiana DEM
`data_fish_MBSS`	Fish data, MBSS
`data_mmi_dev`	Metric data for metric stats for mmi development
`markExcluded()`	Mark "exclude" (non-distinct / non-unique / ambiguous) taxa
`metric.scores()`	Score metrics
`metric.stats()`	Calculate metric statistics
`metric.stats2()`	Secondary metric statistics
`metric.values()`	Calculate metric values
`metvalgrpxl()`	Metric values Groups to Excel
`qc.checks()`	QC checks on metric values
`qc_taxa()`	Quality Control Check on User Data Against Master Taxa List
`rarify()`	Rarify (subsample) biological sample to fixed count
`runShiny()`	run Shiny Example
`taxa_translate()`	Taxa Translate

Reference